A points system would resolve the swarm issue, as you'd need a command ship standard, meaning everyone brings a capital ship, and we can finally balance the larger ships upwards, and just have their points reflect the change, make it a no brainer to take a 200 point ship if you've got a thousand to spend. Make people want to take a single 200 point ship if thats all they're going to get, because 200 points is 200 points.
Some ships are meant to be better than others, and I could just pay points for a better, healthier White Star, and not have to constantly be balancing towards some imaginary raid level standard.
I can pay for upgrades with points, instead of as a variant, and trim the fat and only take what I feel I need in cases where I don't need a fighter bay or scout.