Does this remind you of a certain movie from 2005?
Wash: "Yeah well, if she doesn't give us some extra flow from the engine room to offset the burn through, this landing is gonna get pretty interesting."
Mal: "Define interesting."
Wash: "Oh god oh god we're all gonna die?"
Mal: "This is the captain. We have a ... little problem with our engine sequence, so we may experience some slight turbulence and then ... explode."
...
Mal: "Yeah well, just get us on the ground."
Wash: "That part will happen pretty definitely."
-Serenity
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If the Pilot has time, best if he considers expanding the timeframe of the landing to obtain at least a +1 DM.
If not, fudge the Effect to be a marginal success at best; the ship lands, but roughly, and it needs repairs. Probably the Port Authority ends up billing the Captain for repairs to the landing pad, the Pilot takes a cut in pay or - at worst - the Captain demotes the Pilot to Astrogator or Engineering Assistant or Assistant Steward or something and hires a new Pilot with a better Pilot skill and a track record of not landing the ship nose down on the tarmac.