Well, I just got a set of these in via my local game store, and, for the convenience of others purchasing the product for use in CTA:SF, here is a list of the applicable contents:
Federation
DNG - 1
DNF - 1
BCG - 1
BCJ - 1
BCF - 1
NCC - 1
CC - 1
NCA - 2
CA - 2
CS - 3
NCF - 1
CF - 1
NCL - 3
OCL - 3
DW - 3
FFB - 3
FFG - 3
POL - 3
Klingon
C8 - 1
C7 - 1
D7C - 1
FD7 - 1
D7 - 2
D6 - 3
D5W - 3
D5 - 3
F5 - 3
E4 - 3
Romulan
CON - 1
RHK - 1
NHK - 1
FFH - 1
FH - 3
SPA - 3
SKH - 3
K9R - 1
KRC - 1
KR - 2
K5R - 3
KE - 3
WE - 3
BH - 3
SNB - 3
Gorn
DN - 1
BCH - 1
CC - 1
BCF - 1
BC - 2
CS - 1
CM - 2
CL - 3
HDD - 3
BDD - 3
DD - 3
Kzinti
DN - 1
BCH - 2
CC - 1
BC - 2
CF - 1
NCC - 1
NCA - 2
CM - 3
CL - 3
DW - 3
FF - 3
Tholian
CA - 3
DD - 3
PC - 3
Orion
SAL - 2
CR - 2
LR - 2
Misc
FS (small freighter) - 2
FL (large freighter) - 2
F OL (FH Heavy Freighter In CTA:FS) - 1
FT (free trader) - 2
APT (Armed Priority Trader) - 3
BATS (Battlestation) - 1
MB (Mobile Base) - 1
Useful Others
1 Class-M looking planet
1 Other Planet (its green)
1 Moon (airless rock type)
5 Jindarian heavies that can be repurposed as asteroid counters (since they're asteroid-ships)
Several Tugs (1 for each race) that could be used as the objective ship counter in several scenarios
WYN Auxiliary warships (heavilymodified armed freighters) that could fill in as extra freighters (2 FS, 1 FL, 1 FH)
1 WYN Orion-Built LR that can be used as an Orion LR
2 WYN captured Kiznti Frigates that can be used as normal Kzinti FFs
1 Orion Free Traitor that can be used as a normal FT FreeTrader
Space Monsters!
The Juggernaut!
The Planet Killer!
The Space Ameoba!
The Space Dragon!
The following races aren't in CTA:SF (yet!) but are represented on the counter sheets, most of these have a full fleet's worth of minis in numbers similar to the above.
More Tholians
More Orions
Hydrans (no fighter counters)
Lyrans (Regular and Democratic Republic) (LDR have a smallish selection)
WYN Cluster
Seltorian (smallish selection)
Inter Stellar Concordium
Jindarians (smallish)
Andromedans
Vudar (smallish)